Package: Apoderoides
Type: Package
Title: Prioritize and Delete Erroneous Taxa in a Large Phylogenetic
        Tree
Version: 3.0.0
Authors@R: c(person(given="Satoshi",family="Aoki",role=c("aut","cph","cre"),email="aokis1ll1@gmail.com"),person(given="Keita",family="Fukasawa",role="ctb"))
Date: 2024-07-10
Description: Finds, prioritizes and deletes erroneous taxa in a
        phylogenetic tree. This package calculates scores for taxa in a
        tree. Higher score means the taxon is more erroneous. If the
        score is zero for a taxon, the taxon is not erroneous. This
        package also can remove all erroneous taxa automatically by
        iterating score calculation and pruning taxa with the highest
        score.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
URL: https://github.com/Sa-to-shi-A-o-ki/Apoderoides
BugReports: https://github.com/Sa-to-shi-A-o-ki/Apoderoides/issues
Depends: R (>= 3.5.0)
Imports: ape, Rcpp, RcppProgress
LinkingTo: Rcpp,RcppProgress
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
Repository: https://sa-to-shi-a-o-ki.r-universe.dev
Date/Publication: 2024-07-10 05:33:21 UTC
RemoteUrl: https://github.com/sa-to-shi-a-o-ki/apoderoides
RemoteRef: HEAD
RemoteSha: d206449a55b4d1a338c8f3e5693f6067533a13bf
NeedsCompilation: yes
Packaged: 2026-07-04 12:35:19 UTC; root
Author: Satoshi Aoki [aut, cph, cre],
  Keita Fukasawa [ctb]
Maintainer: Satoshi Aoki <aokis1ll1@gmail.com>